a continuation of this posted by same user...:
http://www.rejetto.com/forum/bug-reports/icons-don't-survive-hfs-restart/?topicseen----------------------------------------------------------------
you answered the question on this forum topic with your start post... it works in windows, but doent in linux....
Its hard to say what the root cause is...
each Linux distro is different.. each GUI (if you have one is different)...
so its hard to give help....
lets see:
Don't know if you can bring over the icon with the windows to linux method haven't tested....
the save location on linux will be difference on windows....
memory serves:
(there actual is a hidden folder directly inside HFS, that directory holds the ICO files among other scripts such as the jqurey....)
It been a while and i need to get a re look at the program menu, i think it can open that folder path (as it doen't exist when hfs is not running - which may be why its goen upon restart! -) ........
but the problem realy comes down to:
is the linux compabilty layer in wine... that prevent HFS form saveing those files....
-could even be a permsion isue via linux....
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Back when i test a way older version of HFS on ubuntu 7 with gnome 2, this feature was working, but i had aces to the icon direct and theming and other "BS" that made linux look(gnome 2 / emerald / qurt 4/ qt 4 / etc open source destroyed becuase of unity and gnome 3.0 ont he ubuntu distro....) and i was sucessfuly able to make a ubuntu gnome 2 work and look like a windwos xp - windwos 7 OS....(but it was linux and other stuff that no longer aviable nor around...

)
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so, my only advice to you is program icon form a templte file via:
http://www.w3schools.com/icons/or look into where your Linux distort / gui stores the defualt ICO files.... not going any further into this one...